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  • Top cofit genes for PP_4647 from Pseudomonas putida KT2440

    transcriptional regulator, LuxR family
    SEED: Transcriptional activator protein SolR
    KEGG: LuxR family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_3376 putative phosphonate dehydrogenase 0.64 0.25
    2 PP_1063 DNA-binding transcriptional regulator, homocysteine-binding no 0.23
    3 PP_1051 Type II secretion pathway protein XcpV no 0.22
    4 PP_4349 conserved protein of unknown function no 0.22
    5 PP_0788 conserved protein of unknown function no 0.22
    6 PP_4652 putative Membrane protein no 0.20
    7 PP_0570 lipoprotein of unknown function 0.67 0.19
    8 PP_5SB 5S ribosomal RNA no 0.19
    9 PP_2714 Sensor histidine kinase no 0.19
    10 PP_5070 ParA family protein no 0.18
    11 PP_3879 Phage portal protein, HK97 family no 0.18
    12 PP_2173 Transcriptional regulator, AraC family no 0.18
    13 PP_1009 glyceraldehyde-3-phosphate dehydrogenase 0.70 0.17
    14 PP_2778 3-oxoacyl-(Acyl-carrier-protein) synthase II no 0.17
    15 PP_3513 Transcriptional regulator, LysR family no 0.17
    16 PP_2973 diacylglycerol kinase no 0.17
    17 PP_1662 conserved protein of unknown function no 0.17
    18 PP_0841 DNA-binding transcriptional dual regulator 2Fe-2S cluster IscR 0.64 0.17
    19 PP_3785 conserved protein of unknown function no 0.17
    20 PP_0506 putative ABC efflux transporter, permease protein no 0.17

    Or look for negative cofitness