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Cofit
Protein
Homologs
Top cofit genes for PP_4643 from
Pseudomonas putida KT2440
Xanthine/uracil permease family protein
SEED: Xanthine permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4804
RlpA-like lipoprotein
no
0.18
2
PP
_5718
conserved membrane protein of unknown function
no
0.16
3
PP
_3999
Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase
0.69
0.16
4
PP
_3432
conserved exported protein of unknown function
no
0.16
5
PP
_3834
conserved protein of unknown function
no
0.16
6
PP
_3192
conserved protein of unknown function
no
0.16
7
PP
_4693
RNA polymerase-binding transcription factor DksA
no
0.16
8
PP
_4696
Nitrogen regulation protein NR(I)
no
0.15
9
PP
_4964
D-erythrose 4-phosphate dehydrogenase
0.25
0.15
10
PP
_1656
ATP:GTP 3'-pyrophosphotransferase
no
0.15
11
PP
_1454
conserved protein of unknown function
no
0.15
12
PP
_3770
conserved protein of unknown function
no
0.15
13
PP
_2778
3-oxoacyl-(Acyl-carrier-protein) synthase II
0.29
0.15
14
PP
_0144
Metalloprotease, insulinase family
no
0.15
15
PP
_5153
putative isomerase/hydrolase
no
0.15
16
PP
_3520
conserved exported protein of unknown function
no
0.15
17
PP
_0106
cytochrome c oxidase subunit 3
0.43
0.15
18
PP
_1587
NhaP-type Na+/H+ and K+/H+ antiporters
0.39
0.14
19
PP
_1655
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
no
0.14
20
PP
_0083
tryptophan synthase beta chain
no
0.14
Or look for
negative cofitness