Top cofit genes for PP_4627 from Pseudomonas putida KT2440

transcriptional regulator, LysR family
SEED: LysR family regulatory protein CidR

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_3300		Transcriptional regulator, tetR family	no	0.19
2	PP_3123		acetoacetyl CoA-transferase (subunit B)	0.23	0.17
3	PP_1390		conserved exported protein of unknown function	no	0.16
4	PP_0901		DNA-binding response regulator	no	0.15
5	PP_0902		integral membrane sensor signal transduction histidine kinase	no	0.15
6	PP_3074		D-beta-hydroxybutyrate permease	no	0.15
7	PP_3076		putative ABC transporter permease protein	no	0.14
8	PP_3475		putative type II secretory pathway, pseudopilin pulG-related signal peptide protein	no	0.14
9	PP_0223		Monooxygenase, DszC family	no	0.14
10	PP_1002		arginine/ornithine antiporter	no	0.14
11	PP_3072		Ecotin	no	0.14
12	PP_2835		putative oxidoreductase	no	0.14
13	PP_3073		3-hydroxybutyrate dehydrogenase	no	0.13
14	PP_5229		conserved protein of unknown function	no	0.13
15	PP_0874		conserved protein of unknown function	no	0.13
16	PP_3436		chloramphenicol-sensitive protein	no	0.13
17	PP_2733		conserved membrane protein of unknown function	no	0.13
18	PP_4592		putative metal dependent hydrolase	no	0.13
19	PP_4859		Transcriptional regulator, TetR family	0.76	0.13
20	PP_0345		putative Heptose kinase WapP	no	0.13

Or look for negative cofitness