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  • Top cofit genes for PP_4618 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: Protein sirB1

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2556 Chromate transporter no 0.20
    2 PP_3104 conserved protein of unknown function no 0.20
    3 PP_4162 conserved membrane protein of unknown function 0.56 0.18
    4 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB no 0.17
    5 PP_3632 Transcriptional regulator, LysR family no 0.17
    6 PP_4004 DNA translocase FtsK no 0.17
    7 PP_1215 Crossover junction endodeoxyribonuclease RuvC no 0.17
    8 PP_3166 catechol 1,2-dioxygenase no 0.17
    9 PP_0553 Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system 0.27 0.17
    10 PP_4121 NADH-quinone oxidoreductase subunit C/D no 0.17
    11 PP_0887 Sensor histidine kinase no 0.17
    12 PP_2160 NADPH-dependent 7-cyano-7-deazaguanine reductase 0.71 0.17
    13 PP_1629 Protein RecA no 0.17
    14 PP_4589 D-isomer specific 2-hydroxyacid dehydrogenase family protein 0.30 0.16
    15 PP_3614 conserved membrane protein of unknown function no 0.16
    16 PP_5249 Transcriptional regulator, LysR family no 0.16
    17 PP_3143 Transcriptional regulator, LysR family 0.28 0.16
    18 PP_2223 conserved protein of unknown function 0.24 0.16
    19 PP_5310 junction-specific ATP-dependent DNA helicase no 0.16
    20 PP_2626 conserved protein of unknown function no 0.16

    Or look for negative cofitness