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  • Top cofit genes for PP_4608 from Pseudomonas putida KT2440

    RNA polymerase sigma-70 factor, ECF subfamily
    SEED: FIG006045: Sigma factor, ECF subfamily
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4848 Curved DNA-binding protein 0.53 0.16
    2 PP_2597 conserved protein of unknown function no 0.15
    3 PP_3959 Voltage-gated chloride channel family protein 0.51 0.15
    4 PP_5353 conserved exported protein of unknown function no 0.15
    5 PP_0774 Phosphate acetyltransferase no 0.14
    6 PP_2550 putative transcriptional regulatory protein no 0.14
    7 PP_0493 selenocysteine synthase no 0.13
    8 PP_4857 uncharacterized protein YhjG 0.24 0.13
    9 PP_5073 conserved exported protein of unknown function no 0.13
    10 PP_4072 conserved protein of unknown function no 0.13
    11 PP_0840 serine acetyltransferase no 0.13
    12 PP_2320 conserved exported protein of unknown function no 0.13
    13 PP_2785 conserved exported protein of unknown function no 0.13
    14 PP_0573 conserved protein of unknown function no 0.13
    15 PP_4589 D-isomer specific 2-hydroxyacid dehydrogenase family protein no 0.13
    16 PP_0578 putative Methyltransferase no 0.12
    17 PP_2410 cation efflux system protein no 0.12
    18 PP_1690 conserved protein of unknown function no 0.12
    19 PP_3862 putative Phage assembly protein no 0.12
    20 PP_0660 S-methyl-L-methionine transporter no 0.12

    Or look for negative cofitness