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  • Top cofit genes for PP_4602 from Pseudomonas putida KT2440

    Transcriptional regulator, AraC family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1257 putative 1-pyrroline-4-hydroxy-2-carboxylate deaminase 0.29 0.77
    2 PP_1259 Aspartate-proton symporter 0.29 0.75
    3 PP_1258 4-hydroxyproline epimerase 0.91 0.68
    4 PP_1256 putative alpha-ketoglutarate semialdehyde dehydrogenase 0.20 0.66
    5 PP_1255 putative cis-4-hydroxy-D-proline oxidase 0.22 0.65
    6 PP_1676 subunit of adenosylcobinamide-phosphate synthase beta component 0.30 0.17
    7 PP_1674 5,6-dimethylbenzimidazole synthase 0.23 0.16
    8 PP_1681 cobalamin 5'-phosphate synthase / Cobalamin synthase no 0.16
    9 PP_1673 cobyrinate a,c-diamide synthase no 0.15
    10 PP_4830 precorrin-6Y C(5,15)-methyltransferase 0.36 0.15
    11 PP_3507 Aerobic cobaltochelatase subunit CobN no 0.15
    12 PP_1025 2-isopropylmalate synthase 0.16 0.15
    13 PP_1675 Subunit of adenosylcobinamide-phosphate synthase beta component no 0.14
    14 PP_3999 Uroporphyrinogen-III C-methyltransferase/Precorrin-2 dehydrogenase/Sirohydrochlorin ferrochelatase 0.21 0.13
    15 PP_0291 conserved protein of unknown function 0.27 0.13
    16 PP_2371 Sulphite reductase hemoprotein, beta subunit 0.17 0.13
    17 PP_5015 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) no 0.13
    18 PP_4826 Precorrin-3B C17-methyltransferase 0.80 0.13
    19 PP_4827 Precorrin-2 C(20)-methyltransferase no 0.13
    20 PP_3384 gluconate 2-dehydrogenase gamma subunit no 0.13

    Or look for negative cofitness