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  • Top cofit genes for PP_4589 from Pseudomonas putida KT2440

    D-isomer specific 2-hydroxyacid dehydrogenase family protein
    SEED: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2319 conserved protein of unknown function no 0.31
    2 PP_4162 conserved membrane protein of unknown function no 0.27
    3 PP_2322 Major outer membrane lipoprotein no 0.27
    4 PP_4610 conserved protein of unknown function containing PepSY-associated TM helix domain no 0.26
    5 PP_4342 flagellar synthesis regulator, putative ATPase no 0.25
    6 PP_2320 conserved exported protein of unknown function no 0.25
    7 PP_4004 DNA translocase FtsK 0.47 0.24
    8 PP_0123 DNA polymerase I, 5 0.24 0.24
    9 PP_1202 putative enzyme involved in modification of phospholipids no 0.24
    10 PP_1201 conserved exported protein of unknown function no 0.24
    11 PP_1983 PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase no 0.24
    12 PP_1468 Tyrosine recombinase XerD no 0.24
    13 PP_0887 Sensor histidine kinase no 0.23
    14 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily no 0.23
    15 PP_2323 conserved protein of unknown function no 0.23
    16 PP_1215 Crossover junction endodeoxyribonuclease RuvC 0.18 0.23
    17 PP_5469 putative SAM-dependent methyltransferase 0.33 0.23
    18 PP_4343 Flagellar biosynthesis protein FlhF 0.15 0.22
    19 PP_3735 ABC transporter ATP-binding protein no 0.22
    20 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase 0.41 0.22

    Or look for negative cofitness