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  • Top cofit genes for PP_4585 from Pseudomonas putida KT2440

    RNA methyltransferase, TrmH family
    SEED: tRNA (guanosine(18)-2'-O)-methyltransferase (EC 2.1.1.34)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4220 non-ribosomal peptide synthetase (subunit of ferribactin synthase) no 0.24
    2 PP_3950 Methyl-accepting chemotaxis transducer no 0.22
    3 PP_4243 non-ribosomal peptide synthase (subunit of ferribactin synthase) no 0.21
    4 PP_4221 non-ribosomal peptide synthetase (subunit of ferribactin synthase) no 0.21
    5 PP_4163 conserved exported protein of unknown function no 0.21
    6 PP_4219 non-ribosomal peptide synthetase no 0.21
    7 PP_5252 conserved exported protein of unknown function no 0.20
    8 PP_1890 Type 1 pili chaperone protein FimC no 0.20
    9 PP_5136 ABC transporter, permease protein no 0.20
    10 PP_5632 enzyme subunit involved in allo-isoleucine metabolism no 0.20
    11 PP_4841 putative Urea ABC transporter, periplasmic protein no 0.20
    12 PP_0584 Methyl-accepting chemotaxis transducer 0.24 0.19
    13 PP_4925 conserved protein of unknown function no 0.19
    14 PP_2886 putative Cytochrome b561 no 0.19
    15 PP_3857 conserved protein of unknown function no 0.19
    16 PP_1853 Transcriptional regulator, LysR family no 0.19
    17 PP_5727 protein of unknown function no 0.19
    18 PP_0054 conserved membrane protein of unknown function no 0.18
    19 PP_3375 endonuclease I no 0.18
    20 PP_2524 HD domain protein no 0.18

    Or look for negative cofitness