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  • Top cofit genes for PP_4579 from Pseudomonas putida KT2440

    Transcriptional regulator, LysR family
    SEED: Cyn operon transcriptional activator

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4578 Major facilitator family transporter 0.62 0.52
    2 PP_4576 allophanate hydrolase subunit 0.53 0.39
    3 PP_4577 UPF0271 protein PP_4577 0.62 0.32
    4 PP_4575 Urea amidolyase-related protein 0.62 0.25
    5 PP_5314 Rubredoxin-NAD(+) reductase no 0.22
    6 PP_0937 endoribonuclease G (RNAse G) no 0.19
    7 PP_0882 dipeptide ABC transporter - periplasmic binding protein no 0.16
    8 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.36 0.15
    9 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex no 0.14
    10 PP_0146 putative transport protein no 0.14
    11 PP_0564 conserved protein of unknown function no 0.13
    12 PP_1791 putative Aldolase/synthase no 0.13
    13 PP_1762 conserved protein of unknown function no 0.13
    14 PP_5607 conserved membrane protein of unknown function no 0.12
    15 PP_2861 Methyl-accepting chemotaxis transducer no 0.12
    16 PP_2040 Major facilitator family transporter no 0.12
    17 PP_2362 putative usher protein 0.45 0.11
    18 PP_5250 proline-specific outer membrane porin D no 0.11
    19 PP_2965 putative tnpA repressor TnpC no 0.11
    20 PP_4955 conserved exported protein of unknown function no 0.11

    Or look for negative cofitness