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  • Top cofit genes for PP_4565 from Pseudomonas putida KT2440

    Isocitrate dehydrogenase kinase/phosphatase
    SEED: Isocitrate dehydrogenase phosphatase (EC 2.7.11.5)/kinase (EC 3.1.3.-)
    KEGG: isocitrate dehydrogenase kinase/phosphatase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0763 Medium-chain-fatty-acid CoA ligase 0.95 0.55
    2 PP_4116 isocitrate lyase 0.99 0.48
    3 PP_5659 protein of unknown function no 0.45
    4 PP_0356 malate synthase G 0.99 0.44
    5 PP_0767 Transcriptional regulator, LuxR family 0.33 0.43
    6 PP_0248 Probable alpha-L-glutamate ligase 0.76 0.43
    7 PP_0381 Coenzyme PQQ synthesis protein F 0.31 0.40
    8 PP_4923 Outer membrane efflux protein 0.31 0.40
    9 PP_2675 Cytochrome c-type protein 0.35 0.40
    10 PP_5085 malic enzyme B 0.72 0.38
    11 PP_2665 Glycerol metabolism activator 0.88 0.37
    12 PP_0378 Pyrroloquinoline-quinone synthase 0.31 0.34
    13 PP_0376 Coenzyme PQQ synthesis protein E 0.37 0.34
    14 PP_0379 Coenzyme PQQ synthesis protein B 0.30 0.30
    15 PP_2679 quinoprotein ethanol dehydrogenase 0.32 0.28
    16 PP_0428 aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase 0.23 0.28
    17 PP_0056 choline dehydrogenase 0.73 0.27
    18 PP_1617 S-formylglutathione hydrolase / S-lactoylglutathione hydrolase 0.38 0.26
    19 PP_2682 Fe-containing alcohol dehydrogenase 0.74 0.26
    20 PP_2667 ABC transporter 0.27 0.24

    Or look for negative cofitness