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  • Top cofit genes for PP_4560 from Pseudomonas putida KT2440

    putative Ribonuclease BN
    SEED: Inner membrane protein YihY, formerly thought to be RNase BN
    KEGG: membrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4265 DNA-binding transcriptional dual regulator 0.36 0.63
    2 PP_1002 arginine/ornithine antiporter 0.41 0.59
    3 PP_0856 conserved lipoprotein of unknown function 0.61 0.57
    4 PP_1000 ornithine carbamoyltransferase, catabolic 0.33 0.54
    5 PP_4693 RNA polymerase-binding transcription factor DksA 0.38 0.53
    6 PP_1001 arginine deiminase 0.30 0.52
    7 PP_4895 tRNA dimethylallyltransferase 0.44 0.49
    8 PP_4804 RlpA-like lipoprotein 0.47 0.49
    9 PP_1353 conserved membrane protein of unknown function 0.37 0.48
    10 PP_1783 dTDP-glucose pyrophosphorylase no 0.48
    11 PP_0998 conserved protein of unknown function no 0.46
    12 PP_1654 cysteine synthase B 0.52 0.45
    13 PP_5706 Sec translocation complex - SecG subunit no 0.44
    14 PP_0999 carbamate kinase 0.56 0.43
    15 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase 0.49 0.43
    16 PP_5310 junction-specific ATP-dependent DNA helicase 0.42 0.42
    17 PP_0938 conserved protein of unknown function 0.67 0.42
    18 PP_0393 putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 0.36 0.40
    19 PP_4880 exoribonuclease R no 0.39
    20 PP_4902 Oligoribonuclease no 0.39

    Or look for negative cofitness