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  • Top cofit genes for PP_4559 from Pseudomonas putida KT2440

    peptide deformylase
    SEED: Peptide deformylase (EC 3.5.1.88)
    KEGG: peptide deformylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2210 LysR family transcriptional regulator 0.39 0.25
    2 PP_2566 conserved protein of unknown function containing Leucine-rich repeat domain no 0.24
    3 PP_2455 ribose ABC transporter - ATP-binding subunit 0.35 0.23
    4 PP_t11 tRNA-Lys no 0.21
    5 PP_0094 5'-nucleotidase no 0.20
    6 PP_5153 putative isomerase/hydrolase 0.43 0.20
    7 PP_0973 Nucleoid-associated protein PP_0973 no 0.20
    8 PP_5363 conserved exported protein of unknown function no 0.19
    9 PP_2283 Tail tubular protein A no 0.19
    10 PP_5157 conserved exported protein of unknown function no 0.19
    11 PP_4520 conserved protein of unknown function no 0.19
    12 PP_1527 tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) no 0.19
    13 PP_3166 catechol 1,2-dioxygenase no 0.19
    14 PP_5442 protein of unknown function no 0.19
    15 PP_1734 Probable septum site-determining protein MinC no 0.19
    16 PP_2841 Site-specific recombinase, phage integrase family no 0.19
    17 PP_5549 conserved protein of unknown function no 0.18
    18 PP_2927 conserved protein of unknown function no 0.18
    19 PP_4964 D-erythrose 4-phosphate dehydrogenase no 0.18
    20 PP_2417 putative Iron ABC transporter, permease protein no 0.18

    Or look for negative cofitness