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Cofit
Protein
Homologs
Top cofit genes for PP_4555 from
Pseudomonas putida KT2440
conserved protein of unknown function
SEED: PhnB protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_4011
isocitrate dehydrogenase, NADP(+)-specific
0.15
0.18
2
PP
_3105
conserved membrane protein of unknown function
no
0.17
3
PP
_0508
conserved exported protein of unknown function
no
0.16
4
PP
_1943
formyltetrahydrofolate deformylase
no
0.16
5
PP
_4250
cytochrome c oxidase subunit I, cbb3-type
no
0.16
6
PP
_5343
putative Transcriptional regulator
no
0.16
7
PP
_1008
RNA polymerase subunit sigma-24
no
0.16
8
PP
_4345
Transcriptional regulator, GntR family
no
0.15
9
PP
_2326
Universal stress protein
0.36
0.15
10
PP
_0409
Sensory box histidine kinase
no
0.15
11
PP
_0104
Cytochrome c oxidase subunit 1
0.45
0.15
12
PP
_1084
putative peroxiredoxin
no
0.15
13
PP
_3863
putative Phage tail protein
no
0.15
14
PP
_3316
putative Chaperone-associated ATPase
no
0.15
15
PP
_2974
putative sulfatase
no
0.14
16
PP
_3759
Methylesterase, CheB-like
0.45
0.14
17
PP
_3701
conserved protein of unknown function
no
0.14
18
PP
_4754
Transcriptional regulator, TetR family
no
0.14
19
PP
_4926
HlyD family secretion protein
no
0.14
20
PP
_1489
CheW domain protein
0.31
0.14
Or look for
negative cofitness