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  • Top cofit genes for PP_4550 from Pseudomonas putida KT2440

    long-chain-fatty-acid/CoA ligase
    SEED: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
    KEGG: long-chain acyl-CoA synthetase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4549 long-chain-fatty-acid/CoA ligase 0.93 0.64
    2 PP_0370 Acyl-CoA dehydrogenase family protein 0.92 0.57
    3 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 0.74 0.49
    4 PP_4116 isocitrate lyase 0.61 0.45
    5 PP_0356 malate synthase G 0.28 0.43
    6 PP_5659 protein of unknown function no 0.41
    7 PP_5085 malic enzyme B 0.43 0.37
    8 PP_2137 beta-ketoadipyl CoA thiolase, beta component 0.75 0.37
    9 PP_0767 Transcriptional regulator, LuxR family 0.39 0.36
    10 PP_1941 conserved protein of unknown function no 0.34
    11 PP_2436 Transcriptional regulator, LysR family no 0.32
    12 PP_0368 putative Acyl-CoA dehydrogenase 0.70 0.31
    13 PP_0763 Medium-chain-fatty-acid CoA ligase 0.94 0.30
    14 PP_0248 Probable alpha-L-glutamate ligase no 0.30
    15 PP_4545 beta-ketodecanoyl-(Acyl-carrier-protein) synthase 0.19 0.30
    16 PP_3925 conserved protein of unknown function 0.48 0.29
    17 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.53 0.29
    18 PP_2356 putative Phytochrome family protein 0.83 0.28
    19 PP_4948 Acyl-CoA dehydrogenase family protein no 0.27
    20 PP_2019 adhesin-associated MmpL efflux pump (from data) 0.39 0.27

    Or look for negative cofitness