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  • Top cofit genes for PP_4549 from Pseudomonas putida KT2440

    long-chain-fatty-acid/CoA ligase
    SEED: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
    KEGG: long-chain acyl-CoA synthetase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 0.96 0.70
    2 PP_4550 long-chain-fatty-acid/CoA ligase 0.93 0.64
    3 PP_0370 Acyl-CoA dehydrogenase family protein 0.99 0.63
    4 PP_2137 beta-ketoadipyl CoA thiolase, beta component 0.94 0.58
    5 PP_4116 isocitrate lyase 0.73 0.56
    6 PP_5659 protein of unknown function no 0.54
    7 PP_0356 malate synthase G 0.57 0.53
    8 PP_0368 putative Acyl-CoA dehydrogenase 0.84 0.50
    9 PP_5085 malic enzyme B 0.22 0.44
    10 PP_2356 putative Phytochrome family protein no 0.40
    11 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.68 0.37
    12 PP_4545 beta-ketodecanoyl-(Acyl-carrier-protein) synthase 0.32 0.37
    13 PP_0248 Probable alpha-L-glutamate ligase 0.79 0.34
    14 PP_5007 Polyhydroxyalkanoate granule-associated protein GA2 no 0.32
    15 PP_0766 adhesin-associated sorting protein (DUF1329) (from data) 0.33 0.31
    16 PP_0765 putative adhesin (DUF1302) (from data) 0.35 0.30
    17 PP_0767 Transcriptional regulator, LuxR family 0.29 0.30
    18 PP_2354 Sensory box histidine kinase/response regulator no 0.29
    19 PP_2019 adhesin-associated MmpL efflux pump (from data) 0.32 0.28
    20 PP_3248 Dyp-type peroxidase family protein no 0.27

    Or look for negative cofitness