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  • Top cofit genes for PP_4548 from Pseudomonas putida KT2440

    putative Oxidoreductase
    SEED: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4547 putative Glutamine synthetase no 0.76
    2 PP_0567 Biosynthetic arginine decarboxylase no 0.67
    3 PP_5262 Probable multidrug resistance protein NorM no 0.62
    4 PP_0266 Agmatine deiminase no 0.57
    5 PP_2932 Amidase family protein no 0.50
    6 PP_1842 Glutamine amidotransferase, class I 0.43 0.50
    7 PP_5184 glutamylpolyamine synthetase no 0.42
    8 PP_5212 Oxidoreductase, iron-sulfur-binding no 0.39
    9 PP_0213 succinate-semialdehyde dehydrogenase (NADP+) no 0.38
    10 PP_5096 putative factor involved in shape determination no 0.37
    11 PP_4107 Transcriptional regulator, LysR family no 0.35
    12 PP_5719 choline-responsive transcriptional repressor BetI no 0.35
    13 PP_1758 putative sulfurtransferase containing rhodanese-like domain no 0.33
    14 PP_2908 DNA-binding transcriptional repressor no 0.33
    15 PP_1641 tRNA 2-thiocytidine biosynthesis protein TtcA 0.39 0.30
    16 PP_2181 Transcriptional regulator, Cro/CI family 0.33 0.27
    17 PP_0597 methylmalonate-semialdehyde dehydrogenase no 0.26
    18 PP_0247 Osmolarity sensor protein EnvZ no 0.26
    19 PP_1440 tRNA (mo5U34)-methyltransferase 0.27 0.26
    20 PP_2657 phosphate ABC transporter no 0.26

    Or look for negative cofitness