Top cofit genes for PP_4546 from Pseudomonas putida KT2440

ATP-dependent helicase HrpA
SEED: ATP-dependent RNA helicase HrpA (EC 3.6.4.13)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4988		signal transduction histidine kinase CheA/CheY-like receiver	no	0.53
2	PP_0123		DNA polymerase I, 5	0.63	0.49
3	PP_4124		NADH-quinone oxidoreductase subunit G	no	0.49
4	PP_5028		proline iminopeptidase	no	0.48
5	PP_4121		NADH-quinone oxidoreductase subunit C/D	0.45	0.48
6	PP_4824		Sensor histidine kinase/response regulator	no	0.47
7	PP_4880		exoribonuclease R	0.79	0.47
8	PP_4507		potassium transporter	0.44	0.47
9	PP_4131		NADH-quinone oxidoreductase subunit N	0.49	0.46
10	PP_0832		S-adenosylmethionine:tRNA ribosyltransferase-isomerase	0.33	0.45
11	PP_0065		NAD-binding component of TrK potassium transporter	0.16	0.45
12	PP_1994		tRNA pseudouridine (38-40)synthase	0.66	0.44
13	PP_5309		oxidative and nitrosative stress transcriptional dual regulator	0.63	0.44
14	PP_4120		NADH-quinone oxidoreductase subunit B	0.22	0.43
15	PP_2378		Fe/S biogenesis protein NfuA	0.48	0.43
16	PP_4129		NADH:ubiquinone oxidoreductase, membrane subunit L	no	0.43
17	PP_2929		Carboxynorspermidine/carboxyspermidine decarboxylase	0.21	0.42
18	PP_5294		Ribonuclease PH	0.81	0.42
19	PP_0393		putative 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase	0.23	0.42
20	PP_5310		junction-specific ATP-dependent DNA helicase	0.65	0.41

Or look for negative cofitness