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  • Top cofit genes for PP_4544 from Pseudomonas putida KT2440

    conserved exported protein of unknown function
    SEED: Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1206 basic-amino-acid specific porin OprD no 0.30
    2 PP_2386 conserved protein of unknown function no 0.29
    3 PP_2331 conserved membrane protein of unknown function no 0.27
    4 PP_2330 conserved protein of unknown function no 0.25
    5 PP_1325 putative lipoprotein no 0.24
    6 PP_1215 Crossover junction endodeoxyribonuclease RuvC no 0.23
    7 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase no 0.23
    8 PP_1719 Tail-specific protease prc 0.42 0.23
    9 PP_1200 Probable potassium transport system protein kup no 0.22
    10 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB no 0.22
    11 PP_4516 ATP-dependent DNA 3 no 0.22
    12 PP_4033 Ribonuclease Z no 0.21
    13 PP_1019 carbohydrate-selective porin no 0.21
    14 PP_1131 outer membrane lipoprotein no 0.21
    15 PP_4538 FMN-dependent NADH-azoreductase 2 no 0.21
    16 PP_1238 putative Lipoprotein 0.28 0.20
    17 PP_5250 proline-specific outer membrane porin D no 0.20
    18 PP_4204 antitoxin of the type II toxin-antitoxin MqsRA system and DNA-binding transcriptional repressor no 0.20
    19 PP_4954 conserved membrane protein of unknown function 0.40 0.20
    20 PP_0143 conserved membrane protein of unknown function no 0.20

    Or look for negative cofitness