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  • Top cofit genes for PP_4543 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: COGs COG3146
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0584 Methyl-accepting chemotaxis transducer no 0.18
    2 PP_1882 conserved membrane protein of unknown function no 0.17
    3 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.12 0.17
    4 PP_1656 ATP:GTP 3'-pyrophosphotransferase no 0.17
    5 PP_0208 putative Nitrate ABC transporter, permease protein no 0.17
    6 PP_0750 conserved protein of unknown function no 0.16
    7 PP_2864 conserved protein of unknown function no 0.16
    8 PP_3153 conserved exported protein of unknown function no 0.16
    9 PP_0301 betainyl-CoA thiolase 0.37 0.16
    10 PP_5137 ferric iron ABC transporter, ATP-binding protein no 0.16
    11 PP_5592 conserved protein of unknown function 0.25 0.16
    12 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase no 0.15
    13 PP_2535 putative inner membrane transport protein no 0.15
    14 PP_4312 conserved exported protein of unknown function no 0.15
    15 PP_2025 Exonuclease SbcD no 0.15
    16 PP_2756 conserved protein of unknown function no 0.15
    17 PP_2764 FMN reductase (NADPH) no 0.15
    18 PP_3423 Type II secretion pathway protein XcpT no 0.15
    19 PP_2818 Multidrug efflux RND transporter MexD no 0.15
    20 PP_3088 conserved protein of unknown function no 0.15

    Or look for negative cofitness