Top cofit genes for PP_4541 from Pseudomonas putida KT2440

peptidyl-prolyl cis-trans isomerase A (rotamase A)
SEED: Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8)
KEGG: peptidyl-prolyl cis-trans isomerase A (cyclophilin A)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4063		putative Long-chain-fatty-acid-CoA ligase	no	0.19
2	PP_3955		permease	no	0.17
3	PP_4220		non-ribosomal peptide synthetase (subunit of ferribactin synthase)	no	0.16
4	PP_5648		conserved exported protein of unknown function	0.22	0.15
5	PP_1104		AotO-related protein	0.22	0.15
6	PP_2603		conserved protein of unknown function	no	0.15
7	PP_4986		Channel protein, hemolysin III family	no	0.15
8	PP_4079		conserved protein of unknown function	no	0.15
9	PP_5136		ABC transporter, permease protein	no	0.14
10	PP_4222		putative SyrP protein	0.24	0.14
11	PP_0626		NADH dehydrogenase	0.67	0.14
12	PP_5304		putative Lipoprotein	no	0.13
13	PP_4658		putative methyl-accepting chemotaxis protein	no	0.13
14	PP_4495		aromatic amino acid transport protein	0.29	0.13
15	PP_4863		high-affinity branched-chain amino acid transporter, ATP-binding	0.40	0.13
16	PP_0376		Coenzyme PQQ synthesis protein E	0.56	0.13
17	PP_5728		conserved protein of unknown function containing Rhs repeat-associated core domain	no	0.13
18	PP_0570		lipoprotein of unknown function	0.37	0.13
19	PP_3254		putative Nucleosidase	no	0.13
20	PP_5344		Acetyltransferase	0.31	0.13

Or look for negative cofitness