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  • Top cofit genes for PP_4517 from Pseudomonas putida KT2440

    conserved protein of unknown function
    SEED: FIG00953416: hypothetical protein
    KEGG: uncharacterized protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0872 Peptide chain release factor 3 0.63 0.40
    2 PP_4766 ATP-dependent RNA helicase 0.45 0.39
    3 PP_4880 exoribonuclease R 0.60 0.36
    4 PP_5101 coproporphyrinogen/heterocyclic compound oxidase (aerobic) 0.46 0.33
    5 PP_4944 Carbamoyltransferase 0.39 0.33
    6 PP_0396 conserved protein of unknown function 0.54 0.33
    7 PP_0397 protein kinase 0.30 0.32
    8 PP_4936 O-antigen polymerase no 0.32
    9 PP_0395 putative type IV piliation protein 0.33 0.32
    10 PP_4892 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.55 0.31
    11 PP_5310 junction-specific ATP-dependent DNA helicase 0.27 0.31
    12 PP_4941 conserved exported protein of unknown function 0.61 0.31
    13 PP_1778 Lipopolysaccharide ABC export system, permease protein no 0.30
    14 PP_5309 oxidative and nitrosative stress transcriptional dual regulator 0.31 0.30
    15 PP_3695 conserved protein of unknown function no 0.30
    16 PP_4726 Chaperone protein DnaJ 0.20 0.29
    17 PP_4938 putative Glycosyl transferase 0.39 0.29
    18 PP_4720 putative RNA binding protein 0.70 0.29
    19 PP_5045 tRNA sulfurtransferase 0.62 0.29
    20 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex 0.50 0.29

    Or look for negative cofitness