Top cofit genes for PP_4516 from Pseudomonas putida KT2440

ATP-dependent DNA 3
SEED: ATP-dependent DNA helicase RecQ
KEGG: ATP-dependent DNA helicase RecQ

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_5352		DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex	0.69	0.23
2	PP_0123		DNA polymerase I, 5	0.78	0.23
3	PP_1216		Holliday junction ATP-dependent DNA helicase RuvA	0.52	0.23
4	PP_1629		Protein RecA	0.76	0.23
5	PP_5310		junction-specific ATP-dependent DNA helicase	0.80	0.22
6	PP_4544		conserved exported protein of unknown function	no	0.22
7	PP_1325		putative lipoprotein	0.56	0.21
8	PP_3166		catechol 1,2-dioxygenase	no	0.21
9	PP_2475		Transcriptional regulator, TetR family	no	0.21
10	PP_4004		DNA translocase FtsK	0.29	0.20
11	PP_4124		NADH-quinone oxidoreductase subunit G	0.32	0.20
12	PP_1907		Hydrolase, haloacid dehalogenase-like family	0.63	0.20
13	PP_5084		penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase	0.37	0.20
14	PP_2210		LysR family transcriptional regulator	no	0.20
15	PP_3761		Sensor histidine kinase/response regulator	0.28	0.20
16	PP_5230		Tyrosine recombinase XerC	0.60	0.20
17	PP_0208		putative Nitrate ABC transporter, permease protein	no	0.19
18	PP_1215		Crossover junction endodeoxyribonuclease RuvC	0.45	0.19
19	PP_5353		conserved exported protein of unknown function	no	0.19
20	PP_2214		3-hydroxyacyl-CoA dehydrogenase type-2	0.29	0.19

Or look for negative cofitness