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  • Top cofit genes for PP_4515 from Pseudomonas putida KT2440

    Transcriptional regulator, MarR family
    SEED: Transcriptional regulator SlyA
    KEGG: MarR family transcriptional regulator, transcriptional regulator for hemolysin

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1798 Outer membrane efflux protein no 0.51
    2 PP_3456 Multidrug resistance protein MexB 0.28 0.50
    3 PP_1627 conserved protein of unknown function no 0.50
    4 PP_3627 conserved protein of unknown function no 0.50
    5 PP_0066 Ribosomal RNA small subunit methyltransferase B 0.19 0.49
    6 PP_1075 glycerol kinase 0.28 0.49
    7 PP_1803 UDP-sugar epimerase 0.52 0.47
    8 PP_0540 conserved inner membrane protein 0.65 0.46
    9 PP_1777 phosphomannomutase 0.72 0.46
    10 PP_1789 Hydrolase, haloacid dehalogenase-like family no 0.45
    11 PP_1774 conserved exported protein of unknown function no 0.45
    12 PP_1770 3-phosphoshikimate 1-carboxyvinyltransferase no 0.44
    13 PP_1800 Oxidoreductase Rmd no 0.44
    14 PP_0405 conserved protein of unknown function 0.28 0.44
    15 PP_1355 Muropeptide permease AmpG 0.46 0.43
    16 PP_5284 UPF0758 protein PP_5284 no 0.43
    17 PP_5283 periplasmic dipeptide transport protein 0.59 0.43
    18 PP_1076 aquaglyceroporin no 0.43
    19 PP_3769 conserved exported protein of unknown function no 0.42
    20 PP_1797 HlyD family secretion protein no 0.42

    Or look for negative cofitness