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  • Top cofit genes for PP_4500 from Pseudomonas putida KT2440

    TrpH family protein
    SEED: COG0613, Predicted metal-dependent phosphoesterases (PHP family)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4724 Carbamoyl-phosphate synthase small chain 0.46 0.33
    2 PP_4723 Carbamoyl-phosphate synthase large chain 0.42 0.31
    3 PP_4999 dihydroorotase-like protein 0.33 0.30
    4 PP_2000 amidophosphoribosyl transferase 0.37 0.26
    5 PP_5227 diaminopimelate decarboxylase 0.37 0.22
    6 PP_5315 Rubredoxin-1 no 0.21
    7 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.50 0.21
    8 PP_0691 Glutamate 5-kinase 0.38 0.20
    9 PP_1295 ATP-dependent RNA helicase RhlB 0.53 0.20
    10 PP_4700 pantothenate synthetase 0.26 0.20
    11 PP_0914 GGDEF domain protein no 0.20
    12 PP_4364 putative Anti-sigma F factor antagonist 0.37 0.20
    13 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 0.48 0.19
    14 PP_5437 protein of unknown function no 0.19
    15 PP_1656 ATP:GTP 3'-pyrophosphotransferase 0.51 0.19
    16 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer 0.49 0.19
    17 PP_2682 Fe-containing alcohol dehydrogenase 0.44 0.19
    18 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.46 0.19
    19 PP_0348 conserved protein of unknown function no 0.18
    20 PP_2367 putative inner membrane transport protein no 0.18

    Or look for negative cofitness