Top cofit genes for PP_4494 from Pseudomonas putida KT2440

putative LysR-type transcriptional activator protein

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4493		D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data)	no	0.46
2	PP_5258		L-piperidine-6-carboxylate dehydrogenase	no	0.44
3	PP_3591		Delta 1-piperideine-2-carboxylate reductase	no	0.39
4	PP_3592		Transcriptional regulator, RpiR family	no	0.38
5	PP_5257		L-pipecolate oxidase	no	0.38
6	PP_5260		2-oxoadipate decarboxylase/hydroxylase (2-hydroxyglutarate synthase) (from data)	no	0.35
7	PP_3593		L-lysine and D-lysine ABC transporter, substrate-binding component (from data)	no	0.35
8	PP_3594		L-lysine and D-lysine ABC transporter, permease component 1 (from data)	no	0.32
9	PP_0382		5-aminopentanamidase	no	0.32
10	PP_3597		L-lysine and D-lysine ABC transporter, ATPase component (from data)	no	0.30
11	PP_3595		L-lysine and D-lysine ABC transporter, permease component 2 (from data)	no	0.27
12	PP_4108		2-aminoadipate transaminase (EC 2.6.1.39) (from data)	no	0.26
13	PP_3596		D-lysine oxidase	no	0.25
14	PP_1301		quality control serine endoprotease DegS	no	0.23
15	PP_4330		putative toxin-related protein	no	0.23
16	PP_0383		Lysine 2-monooxygenase	no	0.23
17	PP_1076		aquaglyceroporin	no	0.22
18	PP_3197		Glyoxalase family protein	no	0.21
19	PP_3065		Pyocin R2_PP, tail formation	no	0.21
20	PP_0774		Phosphate acetyltransferase	no	0.20

Or look for negative cofitness