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  • Top cofit genes for PP_4488 from Pseudomonas putida KT2440

    conserved exported protein of unknown function
    SEED: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1262 LysR family transcriptional regulator 0.84 0.26
    2 PP_4610 conserved protein of unknown function containing PepSY-associated TM helix domain no 0.23
    3 PP_3553 AMP-binding domain protein 0.22 0.22
    4 PP_0856 conserved lipoprotein of unknown function 0.26 0.22
    5 PP_4799 putative Muramoyltetrapeptide carboxypeptidase no 0.21
    6 PP_4265 DNA-binding transcriptional dual regulator no 0.21
    7 PP_1001 arginine deiminase no 0.19
    8 PP_3552 Sensory box histidine kinase no 0.19
    9 PP_0691 Glutamate 5-kinase 0.42 0.19
    10 PP_5329 putative phosphate ABC transporter, periplasmic phosphate-binding protein 0.40 0.19
    11 PP_1000 ornithine carbamoyltransferase, catabolic 0.56 0.18
    12 PP_1843 Mg2+/Co2+ transporter no 0.18
    13 PP_0855 conserved protein of unknown function no 0.18
    14 PP_1598 regulatory intramembrane protein RIP zinc protease no 0.18
    15 PP_2322 Major outer membrane lipoprotein 0.30 0.18
    16 PP_1202 putative enzyme involved in modification of phospholipids no 0.18
    17 PP_4755 Outer membrane ferrichrome-iron receptor no 0.18
    18 PP_2320 conserved exported protein of unknown function 0.24 0.17
    19 PP_5541 conserved protein of unknown function no 0.17
    20 PP_0999 carbamate kinase 0.23 0.17

    Or look for negative cofitness