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  • Top cofit genes for PP_4475 from Pseudomonas putida KT2440

    succinylglutamate desuccinylase
    SEED: Succinylglutamate desuccinylase (EC 3.5.1.96)
    KEGG: succinylglutamate desuccinylase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4478 N-succinylglutamate 5-semialdehyde dehydrogenase 0.89 0.57
    2 PP_4722 Transcription elongation factor GreA 0.57 0.53
    3 PP_2645 magnesium transporter, ATP-dependent no 0.48
    4 PP_2379 putative cytochrome oxidase biogenesis protein 0.55 0.48
    5 PP_2646 conserved protein of unknown function no 0.47
    6 PP_0498 conserved protein of unknown function no 0.42
    7 PP_0123 DNA polymerase I, 5 0.60 0.42
    8 PP_4379 Beta-ketoacyl-acyl-carrier-protein synthase I no 0.41
    9 PP_3957 choline/carnitine/betaine transporter BetTC no 0.41
    10 PP_0697 ribosomal-protein-S18-alanine N-acetyltransferase 0.41 0.39
    11 PP_4184 branched chain amino acid transporter no 0.38
    12 PP_0832 S-adenosylmethionine:tRNA ribosyltransferase-isomerase 0.51 0.38
    13 PP_5064 choline dehydrogenase 0.40 0.37
    14 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase 0.66 0.37
    15 PP_0496 Sodium/alanine symporter 0.68 0.36
    16 PP_1646 putative Thioredoxin 0.33 0.36
    17 PP_4250 cytochrome c oxidase subunit I, cbb3-type no 0.35
    18 PP_4286 allantoinase 0.50 0.34
    19 PP_4482 Transcriptional regulator, AraC family 0.77 0.34
    20 PP_2449 conserved protein of unknown function no 0.34

    Or look for negative cofitness