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  • Top cofit genes for PP_4469 from Pseudomonas putida KT2440

    ribose 1,5-bisphosphate phosphokinase
    SEED: ATP-binding protein PhnN; Guanylate kinase (EC 2.7.4.8)
    KEGG: ribose 1,5-bisphosphokinase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.17 0.22
    2 PP_2368 2,5-diketo-D-gluconate reductase 0.27 0.20
    3 PP_3565 Transporter, LysE family no 0.20
    4 PP_5406 transposase no 0.18
    5 PP_0049 conserved protein of unknown function no 0.18
    6 PP_1552 putative Phage replication protein no 0.17
    7 PP_5405 transposase no 0.16
    8 PP_4246 Periplasmic binding protein no 0.16
    9 PP_0129 GGDEF domain protein no 0.16
    10 PP_0024 putative membrane-associated metal-dependent hydrolase no 0.16
    11 PP_1072 Leucine-rich repeat domain protein no 0.15
    12 PP_0026 putative cobalt/cadmium/zinc exporter no 0.15
    13 PP_4272 conserved membrane protein of unknown function no 0.15
    14 PP_0787 quinolinate phosphoribosyltransferase (decarboxylating) monomer no 0.15
    15 PP_0077 choline-sulfatase 0.26 0.14
    16 PP_4171 conserved exported protein of unknown function 0.09 0.14
    17 PP_2072 Transcriptional regulator, AraC family no 0.14
    18 PP_1656 ATP:GTP 3'-pyrophosphotransferase 0.48 0.14
    19 PP_4100 Transcriptional regulator, Cro/CI family 0.43 0.14
    20 PP_2070 Transcriptional regulator, AraC family 0.22 0.14

    Or look for negative cofitness