Top cofit genes for PP_4460 from Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: LysR-family transcriptional regulator

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_1937		putative helicase	no	0.25
2	PP_1940		Methyl-accepting chemotaxis transducer	no	0.24
3	PP_1957		Oxidoreductase, Pdr/VanB family	no	0.21
4	PP_4461		Major facilitator family transporter	0.15	0.21
5	PP_4412		conserved protein of unknown function	no	0.21
6	PP_1934		conserved protein of unknown function	no	0.21
7	PP_3700		putative ATPases involved in chromosome partitioning	no	0.20
8	PP_3383		gluconate 2-dehydrogenase flavoprotein subunit	no	0.20
9	PP_4458		putative Opine ABC transporter, periplasmic binding protein	no	0.19
10	PP_5037		lipocalin family lipoprotein	no	0.18
11	PP_1958		conserved protein of unknown function	no	0.18
12	PP_4450		Phosphoglycerate mutase family protein	no	0.18
13	PP_4459		transposase	no	0.18
14	PP_3919		conserved protein of unknown function	no	0.18
15	PP_4410		conserved protein of unknown function	no	0.17
16	PP_4456		opine oxidase subunit A	no	0.17
17	PP_5463		conserved protein of unknown function	no	0.17
18	PP_1953		Oxidoreductase, short chain dehydrogenase/reductase family	no	0.17
19	PP_4867		branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like)	no	0.17
20	PP_5021		Methyl-accepting chemotaxis transducer	no	0.17

Or look for negative cofitness