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  • Top cofit genes for PP_4455 from Pseudomonas putida KT2440

    glutathione ABC transporter permease subunit
    SEED: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4429 Transcriptional regulator, GntR family no 0.38
    2 PP_1937 putative helicase no 0.37
    3 PP_4421 putative aminotransferase no 0.34
    4 PP_4459 transposase no 0.33
    5 PP_4446 putative Group II intron-encoding maturase no 0.33
    6 PP_4434 D-amino acid dehydrogenase 1 small subunit no 0.32
    7 PP_4445 transposase no 0.30
    8 PP_4453 glutathione ABC transporter ATP-binding subunit 0.96 0.30
    9 PP_4410 conserved protein of unknown function no 0.29
    10 PP_1940 Methyl-accepting chemotaxis transducer no 0.29
    11 PP_4430 putative threonine dehydratase no 0.28
    12 PP_4432 putative Xaa-Pro aminopeptidase no 0.28
    13 PP_4412 conserved protein of unknown function no 0.28
    14 PP_5404 Transposition protein, TnsC-related protein no 0.27
    15 PP_5622 conserved protein of unknown function no 0.27
    16 PP_4450 Phosphoglycerate mutase family protein no 0.27
    17 PP_4457 opine oxidase subunit B 0.29 0.27
    18 PP_1954 conserved protein of unknown function no 0.26
    19 PP_3680 conserved protein of unknown function no 0.26
    20 PP_4420 transposase 0.73 0.26

    Or look for negative cofitness