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  • Top cofit genes for PP_4454 from Pseudomonas putida KT2440

    putative Opine ABC transporter, permease protein
    SEED: opine ABC transporter, permease protein, putative
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4453 glutathione ABC transporter ATP-binding subunit no 0.25
    2 PP_4429 Transcriptional regulator, GntR family no 0.25
    3 PP_5405 transposase no 0.24
    4 PP_4412 conserved protein of unknown function no 0.24
    5 PP_4434 D-amino acid dehydrogenase 1 small subunit no 0.23
    6 PP_4246 Periplasmic binding protein no 0.23
    7 PP_0426 conserved membrane protein of unknown function no 0.22
    8 PP_3692 conserved protein of unknown function no 0.22
    9 PP_5676 conserved protein of unknown function no 0.22
    10 PP_4463 Carbon-nitrogen hydrolase family protein no 0.22
    11 PP_4421 putative aminotransferase no 0.21
    12 PP_4405 Sensory box protein no 0.21
    13 PP_4465 putative Porin no 0.20
    14 PP_5406 transposase no 0.20
    15 PP_4459 transposase no 0.20
    16 PP_4455 glutathione ABC transporter permease subunit no 0.19
    17 PP_4448 conserved protein of unknown function no 0.19
    18 PP_1940 Methyl-accepting chemotaxis transducer no 0.19
    19 PP_4446 putative Group II intron-encoding maturase no 0.19
    20 PP_5404 Transposition protein, TnsC-related protein no 0.19

    Or look for negative cofitness