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  • Top cofit genes for PP_4430 from Pseudomonas putida KT2440

    putative threonine dehydratase
    SEED: Threonine dehydratase, catabolic (EC 4.3.1.19)
    KEGG: threonine dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4445 transposase no 0.37
    2 PP_1937 putative helicase no 0.37
    3 PP_4429 Transcriptional regulator, GntR family no 0.36
    4 PP_4458 putative Opine ABC transporter, periplasmic binding protein no 0.35
    5 PP_1952 Metallo-beta-lactamase family protein no 0.34
    6 PP_4421 putative aminotransferase 0.19 0.33
    7 PP_4433 Amino acid MFS transporter no 0.31
    8 PP_4466 Dioxygenase, TauD/TfdA family no 0.30
    9 PP_1945 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase no 0.30
    10 PP_4428 Amino acid ABC transporter, periplasmic amino acid-binding protein no 0.30
    11 PP_5384 copper sensor protein no 0.30
    12 PP_0160 putative ferrioxamine receptor no 0.29
    13 PP_1792 Glycosyl transferase, group 2 family protein no 0.29
    14 PP_4457 opine oxidase subunit B no 0.29
    15 PP_5404 Transposition protein, TnsC-related protein no 0.29
    16 PP_3692 conserved protein of unknown function no 0.29
    17 PP_5405 transposase no 0.29
    18 PP_4446 putative Group II intron-encoding maturase no 0.29
    19 PP_4459 transposase no 0.29
    20 PP_4455 glutathione ABC transporter permease subunit no 0.28

    Or look for negative cofitness