Top cofit genes for PP_4429 from Pseudomonas putida KT2440

Transcriptional regulator, GntR family
SEED: Transcriptional regulator GabR of GABA utilization (GntR family with aminotransferase-like domain)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4455		glutathione ABC transporter permease subunit	no	0.38
2	PP_5404		Transposition protein, TnsC-related protein	no	0.37
3	PP_4430		putative threonine dehydratase	no	0.36
4	PP_4421		putative aminotransferase	no	0.36
5	PP_1937		putative helicase	no	0.36
6	PP_4463		Carbon-nitrogen hydrolase family protein	no	0.34
7	PP_4412		conserved protein of unknown function	no	0.34
8	PP_4458		putative Opine ABC transporter, periplasmic binding protein	no	0.33
9	PP_4461		Major facilitator family transporter	no	0.32
10	PP_3680		conserved protein of unknown function	no	0.32
11	PP_1940		Methyl-accepting chemotaxis transducer	no	0.32
12	PP_4434		D-amino acid dehydrogenase 1 small subunit	no	0.31
13	PP_4428		Amino acid ABC transporter, periplasmic amino acid-binding protein	0.34	0.31
14	PP_4445		transposase	no	0.31
15	PP_4446		putative Group II intron-encoding maturase	no	0.31
16	PP_5384		copper sensor protein	no	0.31
17	PP_5405		transposase	no	0.31
18	PP_1948		Benzaldehyde dehydrogenase	no	0.30
19	PP_4423		conserved protein of unknown function	no	0.30
20	PP_4459		transposase	no	0.30

Or look for negative cofitness