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  • Top cofit genes for PP_4426 from Pseudomonas putida KT2440

    Amino acid ABC transporter, permease protein
    SEED: amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4430 putative threonine dehydratase no 0.19
    2 PP_3846 (R)-stereoselective amidase no 0.16
    3 PP_4924 Serine protease, subtilase family no 0.16
    4 PP_4428 Amino acid ABC transporter, periplasmic amino acid-binding protein no 0.15
    5 PP_3064 Phage tail protein no 0.14
    6 PP_0426 conserved membrane protein of unknown function no 0.14
    7 PP_4955 conserved exported protein of unknown function no 0.14
    8 PP_4454 putative Opine ABC transporter, permease protein no 0.14
    9 PP_5614 protein of unknown function no 0.14
    10 PP_1346 Glutamate N-acetyltransferase/Amino-acid acetyltransferase 0.24 0.13
    11 PP_0172 ABC transporter, permease protein no 0.13
    12 PP_2982 putative cointegrate resolution protein T Tn4652 no 0.13
    13 PP_5680 putative Cro/CI family transcriptional regulator no 0.13
    14 PP_4448 conserved protein of unknown function no 0.13
    15 PP_0259 purine nucleotidase no 0.13
    16 PP_1877 free methionine-(R)-sulfoxide reductase no 0.13
    17 PP_1394 putative Acetolactate synthase, large subunit no 0.13
    18 PP_5448 conserved protein of unknown function no 0.12
    19 PP_0261 adenosine-3'(2'),5'-bisphosphate nucleotidase no 0.12
    20 PP_4282 Aquaporin Z 0.26 0.12

    Or look for negative cofitness