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  • Top cofit genes for PP_4425 from Pseudomonas putida KT2440

    putative amino-acid ABC transporter ATP-binding protein y4tH
    SEED: amino acid ABC transporter, ATP-binding protein
    KEGG: polar amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4421 putative aminotransferase 0.49 0.26
    2 PP_5405 transposase no 0.26
    3 PP_3680 conserved protein of unknown function no 0.25
    4 PP_3691 DNA helicase-related protein no 0.25
    5 PP_2287 Phage internal core protein no 0.25
    6 PP_3697 conserved protein of unknown function no 0.23
    7 PP_1792 Glycosyl transferase, group 2 family protein 0.32 0.23
    8 PP_4466 Dioxygenase, TauD/TfdA family no 0.22
    9 PP_4411 conserved protein of unknown function no 0.22
    10 PP_1794 conserved hypothetical protein no 0.21
    11 PP_4428 Amino acid ABC transporter, periplasmic amino acid-binding protein 0.17 0.21
    12 PP_1950 conserved protein of unknown function no 0.21
    13 PP_1958 conserved protein of unknown function no 0.20
    14 PP_3692 conserved protein of unknown function no 0.20
    15 PP_4448 conserved protein of unknown function no 0.20
    16 PP_5348 Transcriptional regulator, LysR family no 0.20
    17 PP_5404 Transposition protein, TnsC-related protein no 0.20
    18 PP_3359 putative Hydroxycinnamic acid degradation regulator no 0.20
    19 PP_5740 protein of unknown function no 0.19
    20 PP_2964 putative transposase no 0.19

    Or look for negative cofitness