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  • Top cofit genes for PP_4424 from Pseudomonas putida KT2440

    Uncharacterized HTH-type transcriptional regulator y4tD
    SEED: Transcriptional regulator, AsnC family
    KEGG: Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2070 Transcriptional regulator, AraC family no 0.18
    2 PP_3660 Transcriptional regulator, LysR family no 0.17
    3 PP_3140 Glycosyl transferase, group 2 family protein no 0.16
    4 PP_4453 glutathione ABC transporter ATP-binding subunit no 0.16
    5 PP_1048 putative protein secretion protein for export no 0.16
    6 PP_2894 conserved protein of unknown function no 0.16
    7 PP_0039 hypothetical protein no 0.16
    8 PP_1173 porin-like protein no 0.16
    9 PP_5463 conserved protein of unknown function no 0.15
    10 PP_3358 hydroxycinnamoyl-CoA hydratase-lyase (EC 4.1.2.61) (from data) no 0.15
    11 PP_4246 Periplasmic binding protein no 0.14
    12 PP_1072 Leucine-rich repeat domain protein no 0.14
    13 PP_5386 Probable copper RND efflux membrane fusion protein, CzcB family no 0.14
    14 PP_0947 conserved membrane protein of unknown function no 0.14
    15 PP_2880 Transcriptional regulator, TetR family no 0.14
    16 PP_4218 Lipase/esterase family protein no 0.14
    17 PP_2887 Catalase-related peroxidase no 0.14
    18 PP_3692 conserved protein of unknown function no 0.14
    19 PP_3245 conserved protein of unknown function no 0.14
    20 PP_4706 conserved protein of unknown function no 0.14

    Or look for negative cofitness