Top cofit genes for PP_4401 from Pseudomonas putida KT2440

branched-chain alpha-keto acid dehydrogenase complex, alpha subunit
SEED: Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)
KEGG: 2-oxoisovalerate dehydrogenase E1 component, alpha subunit

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4402		branched-chain alpha-keto acid dehydrogenase complex, beta subunit	0.98	0.94
2	PP_4400		Bkd operon transcriptional regulator	0.92	0.93
3	PP_4403		Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex	0.97	0.92
4	PP_4404		dihydrolipoyl dehydrogenase component of branched-chain alpha-keto acid dehydrogenase complex	0.92	0.73
5	PP_4666		3-hydroxyisobutyrate dehydrogenase	0.75	0.47
6	PP_2217		enoyl-CoA hydratase	0.83	0.45
7	PP_4667		methylmalonate-semialdehyde dehydrogenase	0.79	0.45
8	PP_4064		isovaleryl-CoA dehydrogenase	0.96	0.45
9	PP_4067		methylcrotonyl-CoA carboxylase biotin-containing subunit alpha	0.96	0.42
10	PP_4065		methylcrotonyl-CoA carboxylase biotin-containing subunit beta	0.96	0.42
11	PP_4668		Transcriptional regulator, LysR family	0.85	0.42
12	PP_4066		methylglutaconyl-CoA hydratase	0.70	0.40
13	PP_3491		Enoly-coenzyme A hydratase/isomerase family protein	0.88	0.39
14	PP_2868		Transcriptional regulator, Cro/CI family	0.22	0.38
15	PP_2215		acetyl-CoA acetyltransferase	0.96	0.35
16	PP_1139		branched chain amino acid transporter - permease subunit	0.96	0.35
17	PP_2216		short-chain acyl-CoA dehydrogenase	0.95	0.35
18	PP_5188		putative transcriptional regulator (AsnC/Lrp family)	0.79	0.34
19	PP_1140		branched chain amino acid transporter - permease subunit	0.95	0.33
20	PP_1141		branched-chain amino acids ABC transporter - periplasmic leucine binding subunit	0.93	0.32

Or look for negative cofitness