Top cofit genes for PP_4376 from Pseudomonas putida KT2440

flagellar filament capping protein
SEED: Flagellar hook-associated protein FliD
KEGG: flagellar hook-associated protein 2

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_4378		flagellin, filament structural protein	no	0.96
2	PP_4380		Flagellar hook-associated protein FlgL	0.99	0.96
3	PP_4381		Flagellar hook-associated protein FlgK	0.98	0.96
4	PP_4366		flagellum-specific ATP synthase	0.95	0.92
5	PP_4382		Peptidoglycan hydrolase FlgJ	0.94	0.92
6	PP_4344		flagellar export pore protein	0.96	0.91
7	PP_4384		Flagellar L-ring protein	0.96	0.91
8	PP_4341		RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons	0.96	0.91
9	PP_4388		Flagellar hook protein FlgE	0.97	0.91
10	PP_4361		Flagellar hook-length control protein FliK	0.96	0.89
11	PP_4375		flagellar chaperone, inhibits premature FliC assembly	0.93	0.88
12	PP_4352		flagellin export apparatus, substrate specificity protein	0.95	0.88
13	PP_4394		flagella basal body P-ring formation protein	0.97	0.87
14	PP_4353		Flagellar biosynthetic protein fliR	0.91	0.87
15	PP_4369		Flagellar M-ring protein	0.91	0.87
16	PP_4368		flagellar motor switch protein	0.90	0.86
17	PP_4396		conserved protein of unknown function	0.97	0.86
18	PP_4365		Flagellar protein FliJ	0.94	0.86
19	PP_4383		Flagellar P-ring protein	0.93	0.86
20	PP_4386		flagellar basal-body rod protein FlgF	0.95	0.85

Or look for negative cofitness