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  • Top cofit genes for PP_4375 from Pseudomonas putida KT2440

    flagellar chaperone, inhibits premature FliC assembly
    SEED: Flagellar biosynthesis protein FliS
    KEGG: flagellar protein FliS

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4380 Flagellar hook-associated protein FlgL 0.94 0.89
    2 PP_4376 flagellar filament capping protein 0.96 0.88
    3 PP_4378 flagellin, filament structural protein no 0.88
    4 PP_4381 Flagellar hook-associated protein FlgK 0.96 0.85
    5 PP_4382 Peptidoglycan hydrolase FlgJ 0.93 0.83
    6 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons 0.97 0.82
    7 PP_4388 Flagellar hook protein FlgE 0.94 0.82
    8 PP_4366 flagellum-specific ATP synthase 0.98 0.82
    9 PP_4384 Flagellar L-ring protein 0.98 0.81
    10 PP_4361 Flagellar hook-length control protein FliK 0.90 0.81
    11 PP_4344 flagellar export pore protein 0.97 0.81
    12 PP_4383 Flagellar P-ring protein 0.96 0.78
    13 PP_4352 flagellin export apparatus, substrate specificity protein 0.98 0.78
    14 PP_4386 flagellar basal-body rod protein FlgF 0.98 0.78
    15 PP_4391 flagellar basal-body rod protein FlgB 0.94 0.77
    16 PP_4396 conserved protein of unknown function 0.89 0.76
    17 PP_4353 Flagellar biosynthetic protein fliR 0.98 0.76
    18 PP_4394 flagella basal body P-ring formation protein 0.89 0.76
    19 PP_4385 flagellar basal-body rod protein FlgG 0.93 0.76
    20 PP_4365 Flagellar protein FliJ 0.99 0.76

    Or look for negative cofitness