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  • Top cofit genes for PP_4364 from Pseudomonas putida KT2440

    putative Anti-sigma F factor antagonist
    SEED: Anti-sigma F factor antagonist (spoIIAA-2); Anti-sigma B factor antagonist RsbV

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0417 Anthranilate synthase component 1 0.80 0.51
    2 PP_1231 quinolinate synthase [4Fe-4S] cluster subunit no 0.51
    3 PP_0967 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) 0.46 0.50
    4 PP_2001 O-succinylhomoserine sulfhydrylase 0.73 0.50
    5 PP_1079 Ornithine carbamoyltransferase 0.83 0.50
    6 PP_1995 N-(5'-phosphoribosyl)anthranilate isomerase 0.77 0.50
    7 PP_1088 Argininosuccinate synthase 0.72 0.49
    8 PP_4680 acetohydroxybutanoate synthase / acetolactate synthase 0.72 0.49
    9 PP_4909 phosphoserine phosphatase 0.74 0.49
    10 PP_0421 Anthranilate phosphoribosyltransferase 0.78 0.49
    11 PP_1988 3-isopropylmalate dehydrogenase 0.50 0.49
    12 PP_5097 homoserine O-acetyltransferase 0.79 0.49
    13 PP_0914 GGDEF domain protein 0.80 0.49
    14 PP_0966 Histidinol dehydrogenase 0.75 0.49
    15 PP_1025 2-isopropylmalate synthase 0.52 0.49
    16 PP_1985 3-isopropylmalate dehydratase large subunit 0.72 0.48
    17 PP_5098 methionine biosynthesis protein MetW 0.74 0.48
    18 PP_5128 Dihydroxy-acid dehydratase 0.76 0.48
    19 PP_4679 acetohydroxybutanoate synthase / acetolactate synthase 0.54 0.48
    20 PP_4678 Ketol-acid reductoisomerase 0.71 0.48

    Or look for negative cofitness