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  • Top cofit genes for PP_4353 from Pseudomonas putida KT2440

    Flagellar biosynthetic protein fliR
    SEED: Flagellar biosynthesis protein FliR
    KEGG: flagellar biosynthetic protein FliR

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4344 flagellar export pore protein 1.00 0.93
    2 PP_4352 flagellin export apparatus, substrate specificity protein 1.00 0.92
    3 PP_4384 Flagellar L-ring protein 0.99 0.91
    4 PP_4366 flagellum-specific ATP synthase 1.00 0.91
    5 PP_4388 Flagellar hook protein FlgE 0.99 0.91
    6 PP_4381 Flagellar hook-associated protein FlgK 0.96 0.90
    7 PP_4382 Peptidoglycan hydrolase FlgJ 0.94 0.90
    8 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons 0.99 0.88
    9 PP_4361 Flagellar hook-length control protein FliK 0.93 0.87
    10 PP_4394 flagella basal body P-ring formation protein 0.94 0.87
    11 PP_4391 flagellar basal-body rod protein FlgB 0.98 0.87
    12 PP_4365 Flagellar protein FliJ 0.96 0.87
    13 PP_4390 flagellar basal-body rod protein FlgC 0.98 0.87
    14 PP_4385 flagellar basal-body rod protein FlgG 0.99 0.87
    15 PP_4376 flagellar filament capping protein 0.91 0.87
    16 PP_4380 Flagellar hook-associated protein FlgL 0.97 0.87
    17 PP_4383 Flagellar P-ring protein 0.99 0.87
    18 PP_4389 Flagellar basal-body rod modification protein FlgD 0.98 0.86
    19 PP_4386 flagellar basal-body rod protein FlgF 0.99 0.86
    20 PP_4378 flagellin, filament structural protein no 0.85

    Or look for negative cofitness