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  • Top cofit genes for PP_4345 from Pseudomonas putida KT2440

    Transcriptional regulator, GntR family
    SEED: Transcriptional regulator, GntR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5035 Histidine utilization repressor 0.35 0.25
    2 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 0.82 0.23
    3 PP_2356 putative Phytochrome family protein no 0.21
    4 PP_0356 malate synthase G 0.50 0.20
    5 PP_5659 protein of unknown function no 0.20
    6 PP_1253 Transcriptional regulator, ArsR family no 0.20
    7 PP_3102 conserved protein of unknown function no 0.19
    8 PP_2137 beta-ketoadipyl CoA thiolase, beta component no 0.19
    9 PP_3902 conserved protein of unknown function no 0.19
    10 PP_5236 conserved protein of unknown function no 0.19
    11 PP_4699 3-methyl-2-oxobutanoate hydroxymethyltransferase 0.43 0.19
    12 PP_4116 isocitrate lyase no 0.19
    13 PP_3833 Response regulator 0.25 0.19
    14 PP_2460 ribonucleoside hydrolase 0.25 0.18
    15 PP_2354 Sensory box histidine kinase/response regulator no 0.18
    16 PP_1941 conserved protein of unknown function no 0.18
    17 PP_1367 formyltetrahydrofolate hydrolase no 0.18
    18 PP_1189 conserved hypothetical protein 0.20 0.18
    19 PP_1372 conserved protein of unknown function 0.26 0.18
    20 PP_3663 GGDEF domain protein no 0.18

    Or look for negative cofitness