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  • Top cofit genes for PP_4332 from Pseudomonas putida KT2440

    Chemotaxis protein CheW
    SEED: Positive regulator of CheA protein activity (CheW)
    KEGG: purine-binding chemotaxis protein CheW

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4334 ParA family protein 0.94 0.75
    2 PP_4333 CheW domain protein 0.85 0.69
    3 PP_4338 Chemotaxis histidine kinase CheA 0.89 0.58
    4 PP_4366 flagellum-specific ATP synthase 0.95 0.55
    5 PP_4392 chemotaxis protein methyltransferase 0.97 0.55
    6 PP_4380 Flagellar hook-associated protein FlgL 0.89 0.54
    7 PP_4376 flagellar filament capping protein 0.90 0.54
    8 PP_4375 flagellar chaperone, inhibits premature FliC assembly 0.94 0.53
    9 PP_4381 Flagellar hook-associated protein FlgK 0.94 0.53
    10 PP_4369 Flagellar M-ring protein 0.96 0.53
    11 PP_4368 flagellar motor switch protein 0.96 0.52
    12 PP_4384 Flagellar L-ring protein 0.94 0.52
    13 PP_4378 flagellin, filament structural protein no 0.52
    14 PP_4382 Peptidoglycan hydrolase FlgJ 0.93 0.51
    15 PP_4358 flagellar synthesis, switching and energizing component 0.97 0.51
    16 PP_4367 Flagellar assembly protein FliH 0.89 0.51
    17 PP_4365 Flagellar protein FliJ 0.95 0.51
    18 PP_4341 RNA polymerase sigma 28 (sigma F) factor for class III flagellar operons 0.95 0.50
    19 PP_4394 flagella basal body P-ring formation protein 0.88 0.50
    20 PP_4388 Flagellar hook protein FlgE 0.95 0.50

    Or look for negative cofitness