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  • Top cofit genes for PP_4320 from Pseudomonas putida KT2440

    cytochrome c-type biogenesis protein
    SEED: Cytochrome c heme lyase subunit CcmH
    KEGG: cytochrome c-type biogenesis protein CcmH

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1318 Cytochrome b 0.85 0.52
    2 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.83 0.46
    3 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.82 0.43
    4 PP_4261 cation-transporting P-type ATPase 0.87 0.42
    5 PP_1860 Organic hydroperoxide resistance transcriptional regulator 0.65 0.37
    6 PP_4259 Iron-sulfur cluster-binding protein 0.88 0.35
    7 PP_4250 cytochrome c oxidase subunit I, cbb3-type 0.62 0.34
    8 PP_4263 putative membrane-bounded cytochrome biogenesis cycZ-like domain, copper tolerance protein 0.86 0.32
    9 PP_4143 conserved protein of unknown function 0.75 0.31
    10 PP_4260 conserved protein of unknown function 0.87 0.30
    11 PP_1719 Tail-specific protease prc 0.59 0.29
    12 PP_0126 Cytochrome c4 0.86 0.29
    13 PP_4131 NADH-quinone oxidoreductase subunit N 0.69 0.29
    14 PP_0984 conserved membrane protein of unknown function 0.77 0.28
    15 PP_0125 putative cytochrome c-type protein 0.48 0.28
    16 PP_1906 ribosomal large subunit pseudouridine synthase C 0.58 0.28
    17 PP_0484 transporter of an unknown substrate 0.65 0.28
    18 PP_4880 exoribonuclease R no 0.27
    19 PP_2123 molybdenum::molybdopterin ligase 0.23 0.27
    20 PP_0378 Pyrroloquinoline-quinone synthase 0.25 0.27

    Or look for negative cofitness