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  • Top cofit genes for PP_4316 from Pseudomonas putida KT2440

    D-isomer specific 2-hydroxyacid dehydrogenase family protein
    SEED: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_0572 peptidoglycan glycosyltransferase 0.39 0.21
    2 PP_2580 conserved protein of unknown function no 0.20
    3 PP_5083 putative Type IV pili biogenesis protein PilM no 0.19
    4 PP_4966 transcriptional regulator of methionine metabolism no 0.19
    5 PP_2351 propionyl-CoA synthetase no 0.18
    6 PP_4588 putative oxidoreductase (nitroreductase family) 0.42 0.18
    7 PP_3664 CDP-diacylglycerol--serine O-phosphatidyltransferase no 0.18
    8 PP_5370 Oxidoreductase-related protein no 0.17
    9 PP_2935 conserved membrane protein of unknown function no 0.17
    10 PP_0827 putative phosphonate transport system permease protein PtxC no 0.17
    11 PP_1161 putative Lipoprotein no 0.17
    12 PP_4479 arginine N-succinyltransferase, subunit beta no 0.17
    13 PP_0147 Citrate transporter no 0.17
    14 PP_1421 putative Sensor histidine kinase TctE 0.33 0.17
    15 PP_2931 conserved protein of unknown function no 0.17
    16 PP_0570 lipoprotein of unknown function no 0.16
    17 PP_5606 conserved exported protein of unknown function with YVTN beta-propeller repeat no 0.16
    18 PP_2603 conserved protein of unknown function no 0.16
    19 PP_4154 putative class 3 aminotransferase no 0.16
    20 PP_0661 putative Transcriptional regulator AmpR no 0.16

    Or look for negative cofitness