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  • Top cofit genes for PP_4311 from Pseudomonas putida KT2440

    putative D-amino acid dehydrogenase 2 small subunit
    SEED: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
    KEGG: D-amino-acid dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4243 non-ribosomal peptide synthase (subunit of ferribactin synthase) no 0.20
    2 PP_4246 Periplasmic binding protein no 0.19
    3 PP_2591 Ferric anguibactin-binding protein no 0.19
    4 PP_4294 conserved inner membrane protein 0.27 0.19
    5 PP_4658 putative methyl-accepting chemotaxis protein no 0.19
    6 PP_2248 putative transporter no 0.19
    7 PP_4412 conserved protein of unknown function no 0.19
    8 PP_0130 1,6-anhydro-N-acetylmuramyl-L-alanine amidase 0.20 0.18
    9 PP_2347 DNA-binding response regulator no 0.18
    10 PP_3576 putative Transmembrane sensor 0.56 0.18
    11 PP_2506 conserved membrane protein of unknown function no 0.17
    12 PP_4297 glyoxylate carboligase 0.37 0.17
    13 PP_4272 conserved membrane protein of unknown function no 0.16
    14 PP_4405 Sensory box protein 0.17 0.16
    15 PP_4220 non-ribosomal peptide synthetase (subunit of ferribactin synthase) no 0.16
    16 PP_4346 D-alanine--D-alanine ligase A no 0.16
    17 PP_2060 DNA-binding transcriptional dual regulator - SoxR-reversible one-electron oxidation of its [2Fe-2S] cluster, NADPH-dependent no 0.16
    18 PP_2714 Sensor histidine kinase no 0.16
    19 PP_1574 conserved protein of unknown function no 0.16
    20 PP_0362 Biotin synthase 0.42 0.16

    Or look for negative cofitness