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  • Top cofit genes for PP_4298 from Pseudomonas putida KT2440

    hydroxypyruvate isomerase
    SEED: Hydroxypyruvate isomerase (EC 5.3.1.22)
    KEGG: hydroxypyruvate isomerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4131 NADH-quinone oxidoreductase subunit N no 0.26
    2 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L no 0.25
    3 PP_5028 proline iminopeptidase 0.28 0.23
    4 PP_4124 NADH-quinone oxidoreductase subunit G no 0.23
    5 PP_4824 Sensor histidine kinase/response regulator no 0.23
    6 PP_4122 proton-pumping NADH:ubiquinone oxidoreductase, respiratory complex I, subunit E no 0.23
    7 PP_4121 NADH-quinone oxidoreductase subunit C/D no 0.22
    8 PP_4120 NADH-quinone oxidoreductase subunit B no 0.22
    9 PP_5085 malic enzyme B 0.44 0.20
    10 PP_4130 NADH:ubiquinone oxidoreductase, membrane subunit M no 0.20
    11 PP_1907 Hydrolase, haloacid dehalogenase-like family 0.52 0.20
    12 PP_4549 long-chain-fatty-acid/CoA ligase 0.83 0.20
    13 PP_2136 enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase 0.83 0.20
    14 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.19
    15 PP_4710 tRNA pseudouridine 55 synthase 0.25 0.19
    16 PP_1529 Probable cysteine desulfurase 0.32 0.18
    17 PP_1843 Mg2+/Co2+ transporter no 0.18
    18 PP_t11 tRNA-Lys no 0.18
    19 PP_2638 putative Cellulose synthase operon C protein 0.67 0.18
    20 PP_0080 conserved protein of unknown function no 0.18

    Or look for negative cofitness