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  • Top cofit genes for PP_4297 from Pseudomonas putida KT2440

    glyoxylate carboligase
    SEED: Glyoxylate carboligase (EC 4.1.1.47)
    KEGG: tartronate-semialdehyde synthase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_4246 Periplasmic binding protein 0.20 0.25
    2 PP_4455 glutathione ABC transporter permease subunit 0.73 0.25
    3 PP_4429 Transcriptional regulator, GntR family no 0.24
    4 PP_4279 xanthine dehydrogenase subunit XdhB 0.90 0.23
    5 PP_1582 conserved protein of unknown function no 0.23
    6 PP_4405 Sensory box protein no 0.22
    7 PP_4319 conserved exported protein of unknown function no 0.22
    8 PP_0570 lipoprotein of unknown function 0.37 0.21
    9 PP_4461 Major facilitator family transporter no 0.21
    10 PP_0430 conserved protein of unknown function 0.17 0.20
    11 PP_0099 conserved protein of unknown function 0.38 0.20
    12 PP_4434 D-amino acid dehydrogenase 1 small subunit no 0.20
    13 PP_5639 conserved exported protein of unknown function no 0.20
    14 PP_3141 Glycosyl transferase, WecB/TagA/CpsF family no 0.19
    15 PP_4412 conserved protein of unknown function no 0.19
    16 PP_4459 transposase no 0.19
    17 PP_5605 conserved exported protein of unknown function no 0.19
    18 PP_1654 cysteine synthase B 0.21 0.19
    19 PP_3065 Pyocin R2_PP, tail formation 0.44 0.19
    20 PP_4346 D-alanine--D-alanine ligase A 0.33 0.18

    Or look for negative cofitness