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  • Top cofit genes for PP_4286 from Pseudomonas putida KT2440

    allantoinase
    SEED: Uricase (urate oxidase) (EC 1.7.3.3)

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5502 ribosome modulation factor no 0.39
    2 PP_0951 Ribosome hibernation promoting factor 0.67 0.39
    3 PP_2646 conserved protein of unknown function no 0.38
    4 PP_2645 magnesium transporter, ATP-dependent 0.37 0.38
    5 PP_4342 flagellar synthesis regulator, putative ATPase 0.48 0.36
    6 PP_4591 Ribonuclease D 0.49 0.36
    7 PP_0995 conserved membrane protein of unknown function 0.57 0.35
    8 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.58 0.35
    9 PP_1325 putative lipoprotein no 0.34
    10 PP_0984 conserved membrane protein of unknown function 0.65 0.34
    11 PP_4475 succinylglutamate desuccinylase 0.50 0.34
    12 PP_4008 ATP-dependent serine protease 0.61 0.33
    13 PP_4343 Flagellar biosynthesis protein FlhF no 0.33
    14 PP_1317 Ubiquinol-cytochrome c reductase iron-sulfur subunit 0.57 0.33
    15 PP_1318 Cytochrome b 0.68 0.32
    16 PP_5084 penicillin-insensitive transglycosylase/penicillin-sensitive transpeptidase 0.57 0.32
    17 PP_1224 periplasmic subunit of the TolQRA transport system no 0.32
    18 PP_4250 cytochrome c oxidase subunit I, cbb3-type 0.26 0.32
    19 PP_1906 ribosomal large subunit pseudouridine synthase C 0.65 0.32
    20 PP_0949 putative ATP-binding protein UPF0042 0.46 0.31

    Or look for negative cofitness