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  • Top cofit genes for PP_4264 from Pseudomonas putida KT2440

    oxygen-independent coproporphyrinogen III dehydrogenase
    SEED: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
    KEGG: oxygen-independent coproporphyrinogen III oxidase

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_2148 transcription-repair coupling factor 0.84 0.45
    2 PP_1663 conserved exported protein of unknown function 0.65 0.43
    3 PP_2098 D-alanyl-D-alanine carboxypeptidase 0.87 0.41
    4 PP_1871 Protease HtpX 0.64 0.39
    5 PP_0540 conserved inner membrane protein 0.30 0.38
    6 PP_3627 conserved protein of unknown function no 0.38
    7 PP_4798 putative Membrane-bound lytic murein transglycosylase 0.48 0.37
    8 PP_1777 phosphomannomutase 0.70 0.37
    9 PP_0111 Electron transport protein SCO1/SenC 0.61 0.37
    10 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.36
    11 PP_1918 septation protein 0.74 0.35
    12 PP_4805 membrane-bound lytic murein transglycosylase B 0.64 0.35
    13 PP_1627 conserved protein of unknown function no 0.35
    14 PP_2130 putative Soluble lytic transglycosylase 0.86 0.35
    15 PP_1523 conserved protein of unknown function no 0.34
    16 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.64 0.34
    17 PP_1774 conserved exported protein of unknown function no 0.33
    18 PP_2005 conserved exported protein of unknown function no 0.33
    19 PP_0405 conserved protein of unknown function 0.55 0.33
    20 PP_0180 putative cytochrome c family protein no 0.32

    Or look for negative cofitness